May 28, 2022

A New Pilot Project: TRiP: Transparent Review in Preprints; Powered by Hypothesis Annotation

From Cold Spring Harbor Labs:

Cold Spring Harbor Laboratory (CSHL) today announced a new pilot project—Transparent Review in Preprints (TRiP)—that enables journals and peer review services to post peer reviews of submitted manuscripts on CSHL’s preprint server bioRxiv.


The project is powered by the web annotation tool Hypothesis and will allow participating organizations to post peer reviews in dedicated Hypothesis groups alongside relevant preprints on the bioRxiv website. Authors must opt-in with the journal/service in advance. The use of restricted Hypothesis groups allows participating organizations to control the process and ensure that only reviews they approve are displayed. Readers will continue to be able to post their own reactions to individual preprints through bioRxiv’s dedicated comment section.

eLife and the EMBO Press journals, together with Peerage of Science and Review Commons, two journal-independent peer review initiatives, will be the first to participate. Several other groups plan to join the pilot later, including the American Society for Plant Biology and the Public Library of Science.

A number of journals already post peer reviews on their own websites, but these appear alongside the final published version of the paper rather than the version that was reviewed. Transparent Review in Preprints will allow journals and peer review services to show peer reviews next to the version of the manuscript that was submitted and reviewed.

It is possible that reviews commissioned by a journal will be displayed alongside papers the journal ultimately chooses not to publish. EMBO Press journals will display peer reviews for manuscripts published in their journals. A consortium of multiple journals will also use it for Review Commons, a pre-journal, portable peer-review service that will be launched by EMBO and ASAPbio later this year.


eLife is planning to use this functionality for a new process the journal would offer to peer review preprints without editorial triage for a limited period of time.

“bioRxiv already makes it easy for authors to submit preprints to journals and directs readers’ attention to online conversations around preprints,” said Richard Sever, Co-founder of bioRxiv at CSHL. “Transparent Review in Preprints expands this integration to peer review, promoting transparency and encouraging experiments by journals and other peer-review initiatives.”

“Using open annotation to bring reviews to preprints takes full advantage of its promise, namely the ability to layer diverse perspectives over original documents for the benefit of all,” said Dan Whaley, Founder of Hypothesis. “The scholarly process can only benefit when researchers can immediately know what they previously had no easy way to discover.”

Related Announcements:

Announcing TRiP: Transparent Review in Preprints, Powered by Hypothesis Annotation (via Hypothesis)

EMBO and ASAPbio to Launch a Pre-Journal Portable Review Platform (via EMBO)

Partnering to Streamline Review (via PLos Blog)

About Gary Price

Gary Price ( is a librarian, writer, consultant, and frequent conference speaker based in the Washington D.C. metro area. Before launching INFOdocket, Price and Shirl Kennedy were the founders and senior editors at ResourceShelf and DocuTicker for 10 years. From 2006-2009 he was Director of Online Information Services at, and is currently a contributing editor at Search Engine Land.